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Graduate NIH Training in Biotechnology

Former Trainees

Nathan Domagalski

 

Nathan completed his training program August 2005. He is currently employed as a Research Investigator 2 at Bristol-Myers Squibb Company in the area of pharmaceutical process research and development. 

Project Description

Research by our group has experimentally demonstrated that Escherichia coli (E. coli) may be genetically modified to increase recombinant protein production by eliminating a metabolic pathway.  This modification also decreases acetate production.  Although the gram-negative microorganism E. coli is commonly used in bulk fermentations, the gram-positive microorganism Bacillus subtilis (B. subtilis) offers advantages of reduced toxicity since it lacks lipopolysaccharide (LPS) in the cell wall.  Working with an inherently safer microorganism expands the usefulness of our E. coli discoveries.  Therefore, the goal of our recent research is to increase recombinant protein production in B. subtilis by following the strategies learned while working with E. coli.

Courses

06608A   SAFETY IN SCIENCE/ENGINEERING

06703A   ADV FLUID DYNAMICS

06705A   ADV CHE THERMODYNAMICS

06713A  MATHEMATICAL TECHNIQUES IN CHEMICAL ENGINEERING

06717A   BIOTECH & ENVIRONMENTAL PROCESSES

06702A   ADV KINETICS

06704A   ADV HEAT AND MASS TRANSFER

PT708A   INTRO TO MOLECULAR BIOLOGY

PT737A   FUNDAMENTALS OF BIOMEDICAL SCIENCE

Publications

Engineering of Bacillus subtilis for the Enhanced Total Synthesis of Folic Acid, T. Zhu, Z. Pan, N. Domagalski, R. Koepsel, M.M. Ataai, and M.M. Domach, In Press,   APPLIED & ENV MICROBIOL

Historical Perspective and Basics of Molecular Biology, N.R. Domagalski and MM Domach,  CRC Handbook of Biomedical Engineering, In Press

Comparison of Acetate Minimization Strategies for E. coli and Effect on Green Fluorescent Protein Production, N. Domagalski R. Koepsel, M.M. Ataai, and M.M. Domach , Submitted

Enhanced Heterologous Protein Production and Acetate Minimization in B. subtilis, N. Domagalski,  R. Koepsel, M.M. Ataai, and M.M. Domach, Submitted

Presentations

Domagalski, N., T. Zhu, R. Koepsel, M. M. Ataai, and M. M. Domach.  Protein expression in cells metabolically engineered to have diminished acetate production.  American Chemical Society.  National Meeting, March 2004.  Anaheim, CA.

Domagalski, N., Z. Pan, T. Zhu, K. Ye, R. Koepsel, M. M. Ataai, and M. M. Domach.  Combining enhanced traits of E. coli into B. subtilis.  American Institute of Chemical Engineers.  Annual Meeting, November 2004.  Austin, TX.

Advisor

Michael M. Domach

Professor of Chemical Engineering

Carnegie Mellon University


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